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WIG file support

asked 2012-10-01 11:33:51 -0600

Marlies Dolezal gravatar image

I have 777k Illumina SNP chip genotypes of the same individuals that have now been sequenced, I have been using CNAM to call CNVs from chip data and exported wiggle tracks for each individual and from multivariate analysis. It would be great to be able to load them as annotation tracks to visually assess consensus with read depth information from NGS data, at the moment when I try loading a wiggle file GenomeBrowse crashes.

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answered 2014-04-21 11:46:22 -0600

GenomeBrowse 2.0 has been released! You can download the most recent installer from our website.

Included in the new version is support for converting WIG (Fixed or Variable Step) files to TSF (Golden Helix tabular file format). Once the data has been converted to TSF it can be visualized in GenomeBrowse.

You can find full details in our new GenomeBrowse manual.

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answered 2012-10-01 11:35:04 -0600

Currently, GenomeBrowse does not support wiggle files, we are currently working on implementing this into the software.

Please check our website for upcoming features. GenomeBrowse

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Asked: 2012-10-01 11:33:51 -0600

Seen: 514 times

Last updated: Apr 21 '14