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Import Custom Genomes

asked 2013-04-09 10:50:42 -0600

Eric Dahlstrom gravatar image

Hi, I am just testing out the program, and was wondering if it is possible to import one's own custom genomes without having them curated on your servers?
Is there a way to locally convert a file to the idf format, so that we can view our genomes and our experimental data? I think I see something like that in the SVS program.

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answered 2014-04-21 11:00:46 -0600

GenomeBrowse 2.0 has been released! You can download the most recent installer from our website.

Included in the new version is the ability to add custom genomes to GenomeBrowse. You can find full details in our new GenomeBrowse manual.

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answered 2013-04-11 08:04:53 -0600

Hi Eric,

Currently GenomeBrowse does not have the functionality to import files in a format other than BAM, VCF and IDF. IDF format at the moment can only be created using our commercial product SVS.

Our developers are in the process of updating GenomeBrowse with the ability to create or load custom annotations for genomes not currently supported within the software, but it will be some time before it becomes available.

Please let us know if you have any further questions.

Thanks, Jami...

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Questions should be tagged FeatureRequest for asking about a non-existing feature or proposing a new idea, GeneralInquiry for general questions about GenomeBrowse or directions on how to do something, or RanIntoProblem if you want to report an issue or had difficulty getting to an expected result.


Asked: 2013-04-09 10:50:42 -0600

Seen: 2,824 times

Last updated: Apr 21 '14