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Can I reverse complement the display?

asked 2013-02-11 13:33:22 -0600

John Calley gravatar image

Apologies if I missed this. It seems like it ought to be an easy thing to do but I haven't been able to figure it out.



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answered 2013-02-11 17:07:43 -0600

Hi John,

I may need a little clarification on exactly what you are looking to accomplish. Do you mean you would like to reverse the references sequence so that A would become T, G would become C and vice versa?

If that is the case, we are currently working on that exact feature for GenomeBrowse and if all goes well it should be included in our next major release that is scheduled for early next month. In fact this feature will actually show both the forward and reverse strands.

If this is not exactly what you would like to see can you provide an example of how you envision this feature working on a typical plot.

Thanks, Jami...

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Asked: 2013-02-11 13:33:22 -0600

Seen: 502 times

Last updated: Feb 11 '13