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Hi,
I want to analyse HiSeq data of some E coli mutants. I have the BAM files for the mutants, but as there is no reference (or none that I can see), I am unable to generate a plot.
I have tried to convert the fna.gz available for BW25113 to .tsf to try and use it as a reference with no luck. Is there a way round this?
Many thanks, Arya
