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| 2021-04-12 08:01:18 -0600 | asked a question | Dark reads in pile-up track When displaying some tracks in the browser, in the wide-zoom view, some reads in the pile-up track appear dark (almost black). The color of the pile-up track quickly shifts from the ususal green to black in some areas and I can't identify a reason for it, since the underlaying reads don't seem to have consistent differences in mapping quality or amount of missmatches. Thanks very much in advance! |