Ask Your Question
0

Can you export sequence information?

asked 2016-11-28 14:27:03 -0700

I'd like to export a small piece of sequence information for a specific gene in my genome. Is it possible to do this in genomebrowse?

edit retag flag offensive close merge delete

1 answer

Sort by ยป oldest newest most voted
0

answered 2016-11-29 10:33:57 -0700

Cassidy,

Are you looking to export sequence from a specific gene from the available reference sequence? If so, first you need to plot the reference sequence by clicking on the plot icon in the tool bar and selecting which build. Once the reference sequence is displayed you can zoom into your area of interest >right click and select 'Feature List'. Here is where you are going to find sequence data. From here you can highlight all (ctrl+A) or select a subset of the rows and right click > copy selected sequence to clipboard.

A good rule of thumb, the feature list will only capture the sequence you have displayed. So for more sequence information, simply zoom out and select 'Feature List' . For less sequence zoom in and select 'Feature List'.

Let me know if this answers your question,

-Steve

edit flag offensive delete link more
Login/Signup to Answer

Questions should be tagged FeatureRequest for asking about a non-existing feature or proposing a new idea, GeneralInquiry for general questions about GenomeBrowse or directions on how to do something, or RanIntoProblem if you want to report an issue or had difficulty getting to an expected result.

Question Tools

Follow
1 follower

Stats

Asked: 2016-11-28 14:27:03 -0700

Seen: 12 times

Last updated: Nov 29 '16

Related questions