How to use bam file with a reference to visualize a gene and its location.
Hi there, I am new user of genome browse. I want to see the alignment and location of some genes whose counts are differed during gene count from two different mapping methods. I want to visualize those genes and their proximities.
For that, I picked a ref. genome and a relevant .bam file (by File > plot > browse, the location and the bam file) on the genome browse page but it shows "Data for this zoom level is unavailable until background computation is complete. Try zomming in". What does it mean? I looked in the manual but could not infer the solution of my problem. Please suggest me how to properly visulaize a mapped (.bam) file with a reference geneome. Thank you.
Vibha
