Display phasing in VCFs
Hey there,
When I load a VCF into GenomeBrowser, it nicely displays all my variants for all my samples. However, if I load a VCF with phased haplotypes and Sample1 has genotype 0|1 at Variant1 and 2|0 at Variant2 (a multiallelic variant), then it seems that Sample1 is displayed as 0|1, 0|2 in the browser, not 0|1, 2|0. Is there any option that, for phased VCFs, will force alleles in the same row for a sample to always be of the same haplotype?
Thanks,
Jonathan