annotation tracks from roadmap epigenomics
asked 2013-07-25 15:58:22 -0600
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I would like to add a .wig track NA000006232.1.wig to available annotation files. How do I do it?
asked 2013-07-25 15:58:22 -0600
This post is a wiki. Anyone with karma >75 is welcome to improve it.
I would like to add a .wig track NA000006232.1.wig to available annotation files. How do I do it?
answered 2014-04-21 13:24:57 -0600
This post is a wiki. Anyone with karma >75 is welcome to improve it.
GenomeBrowse 2.0 has been released! You can download the most recent installer from our website.
Included in the new version is support for converting WIG (Fixed or Variable Step) files to TSF (Golden Helix tabular file format). Once the data has been converted to TSF it can be visualized in GenomeBrowse.
You can find full details in our new GenomeBrowse manual.
answered 2013-07-26 12:39:44 -0600
This post is a wiki. Anyone with karma >75 is welcome to improve it.
Hi Peter,
Unfortunately GenomeBrowse does not currently support WIG files directly. You can however use SVS to create an IDF interval annotation track from the WIG file which can then be loaded into GenomeBrowse directly from the Add dialog (it will be available under your SVS Annotations).
Please see the following link to the SVS manual for instructions on using SVS to make the conversion. SVS Manual
Let us know if we can be of further assistance.
Thanks, Jami...
Questions should be tagged FeatureRequest for asking about a non-existing feature or proposing a new idea, GeneralInquiry for general questions about GenomeBrowse or directions on how to do something, or RanIntoProblem if you want to report an issue or had difficulty getting to an expected result.
Asked: 2013-07-25 15:58:22 -0600
Seen: 322 times
Last updated: Apr 21 '14