I have 777k Illumina SNP chip genotypes of the same individuals that have now been sequenced, I have been using CNAM to call CNVs from chip data and exported wiggle tracks for each individual and from multivariate analysis. It would be great to be able to load them as annotation tracks to visually assess consensus with read depth information from NGS data, at the moment when I try loading a wiggle file GenomeBrowse crashes.
GenomeBrowse 2.0 has been released! You can download the most recent installer from our website.
Included in the new version is support for converting WIG (Fixed or Variable Step) files to TSF (Golden Helix tabular file format). Once the data has been converted to TSF it can be visualized in GenomeBrowse.
You can find full details in our new GenomeBrowse manual.
Currently, GenomeBrowse does not support wiggle files, we are currently working on implementing this into the software.
Please check our website for upcoming features. GenomeBrowse
Questions should be tagged FeatureRequest for asking about a non-existing feature or proposing a new idea, GeneralInquiry for general questions about GenomeBrowse or directions on how to do something, or RanIntoProblem if you want to report an issue or had difficulty getting to an expected result.
Asked: 2012-10-01 11:33:51 -0600
Seen: 504 times
Last updated: Apr 21 '14
