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reads fragments

asked 2020-12-07 05:52:25 -0600

Christian Altorfer gravatar image

updated 2020-12-08 03:33:07 -0600


How I can see these fragments/reads from the sequencing? I have 20x sequenced, so there are average 20 reads. But how can see them?

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answered 2020-12-08 03:31:59 -0600

Christian Altorfer gravatar image

Only have vcf data.

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ok I have found the bam files. It works.

Christian Altorfer ( 2020-12-08 04:15:39 -0600 )edit

answered 2020-12-07 13:33:45 -0600

The BAM plots have two portions. The "Coverage" and "Pile-up". The pile-up will be the read fragments stacked efficiently for your inspection. As you zoom, you can see individual sequence details of your aligned reads.

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Asked: 2020-12-07 05:52:25 -0600

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Last updated: Dec 08 '20